BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009E09SP1|AL426053
(812 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1211 1599 0.0
>3x_Contig1211
Length = 5913
Score = 1599 bits (804), Expect = 0.0
Identities = 808/812 (99%)
Strand = Plus / Minus
Query: 1 taagatggatttgaactctagctgcttatttgctattgaccattaacttatgtgcaagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3598 taagatggatttgaactctagctgcttatttgctattgaccattaacttatgtgcaagca 3539
Query: 61 taaaagatgaaagagccatgagagttcccgtaccagcattatatgtaacataattcatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3538 taaaagatgaaagagccatgagagttcccgtaccagcattatatgtaacataattcatct 3479
Query: 121 gtttacatatctttggtgtcgtgaataatttctacatctgctatttataacaagaaaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3478 gtttacatatctttggtgtcgtgaataatttctacatctgctatttataacaagaaaggt 3419
Query: 181 gttcaatctgcaaacatgtaatgtctcaaaggttccaaaaccccagaggaagacacattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3418 gttcaatctgcaaacatgtaatgtctcaaaggttccaaaaccccagaggaagacacattt 3359
Query: 241 ttacattacacagaaaattgatatgatacttctttccttcttgtttctgtttaattttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3358 ttacattacacagaaaattgatatgatacttctttccttcttgtttctgtttaattttgg 3299
Query: 301 gtttttctgataatctgagtggaatagaatagagaaactagtgcaggacacaagtcgagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3298 gtttttctgataatctgagtggaatagaatagagaaactagtgcaggacacaagtcgagg 3239
Query: 361 caaacgattgcmgagtatacagtcaagtgcacattacaaatcacacattttggagcgtga 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3238 caaacgattgcagagtatacagtcaagtgcacattacaaatcacacattttggagcgtga 3179
Query: 421 cggcgcagggcgtattgaatggggaacttcatcggaaggaagtttcatgcacgaaagaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3178 cggcgcagggcgtattgaatggggaacttcatcggaaggaagtttcatgcacgaaagaat 3119
Query: 481 gaaaaataaacattgaaatcgaagtacaactatcctattgaccaaaaaaaaaaaaaaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3118 gaaaaataaacattgaaatcgaagtacaactatcctattgaccaaaaaaaaaaaaaaaaa 3059
Query: 541 aaagagagtcattctgagacaccaggaaatacgcaactkgggaaagagaaatcacctgam 600
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 3058 aaagagagtcattctgagacaccaggaaatacgcaacttgggaaagagaaatcacctgaa 2999
Query: 601 atgagacgagtaggaatcattttacaaatcttttccaagcgggttggtaatgacgggagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2998 atgagacgagtaggaatcattttacaaatcttttccaagcgggttggtaatgacgggagg 2939
Query: 661 tttctattcagtccataggatatggcttacctaccgctaaatggctttttcatgtcatgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2938 tttctattcagtccataggatatggcttacctaccgctaaatggctttttcatgtcatgc 2879
Query: 721 ggctgatgggatttaactgacacagttacatcattacctgattgatgtagttgacacttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2878 ggctgatgggatttaactgacacagttacatcattacctgattgatgtagttgacacttg 2819
Query: 781 agttgatataccaatacagcyctctgatatca 812
|||||||||||||||||||| |||||||||||
Sbjct: 2818 agttgatataccaatacagctctctgatatca 2787
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 20,430
Number of Sequences: 1807
Number of extensions: 20430
Number of successful extensions: 4064
Number of sequences better than 1.0e-20: 1
length of query: 812
length of database: 10,358,551
effective HSP length: 16
effective length of query: 796
effective length of database: 10,329,639
effective search space: 8222392644
effective search space used: 8222392644
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)